metaGOflow
in Software on Shotgun, Metadata

metaGOflow
is a Common Workflow Language (CWL) based pipeline for the analysis of shotgun metagenomic data at the sample level. It was initially built to address the needs of the EMO BON community but it can be used for any type of shotgun sequencing data.
metaGOflow
is based on the tools and subworkflow implemented in the framework of MGnify.